SubtiBank SubtiBank
yybE [2018-05-17 15:53:53]
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yybE [2018-05-17 15:53:53]

similar to transcriptional regulator (LysR family)
locus
BSU40670
pI
7.30
mw
31.26 kDa
protein length
278 aa Sequence Blast
gene length
834 bp Sequence Blast
function
unknown
product
transcriptional regulator (LysR family)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    4,180,564 → 4,181,442

    The protein

    Protein family

  • [SW|LysR family]

    • Expression and Regulation

    Operons

    genes
    [gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]-[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]-[gene|33C3EDF3709AC835C9C50B1B7978BA7C23EC9B9E|yybC]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B849 (yybE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1848 NBRP B. subtilis, Japan]
  • BKE40670 (Δ[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT, downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
  • BKK40670 (Δ[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT, downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT